BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009B06SP1|AL425982
(838 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig644 827 0.0
>3x_Contig644
Length = 3211
Score = 827 bits (417), Expect = 0.0
Identities = 433/437 (99%), Gaps = 1/437 (0%)
Strand = Plus / Plus
Query: 4 gcaccagaattgaacttaataggggttctgatggcagntgacaattgatgaaatggactt 63
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 2772 gcaccagaattgaacttaataggggttctgatggcag-tgacaattgatgaaatggactt 2830
Query: 64 tgttggggaatgttctatgtgggaatacaacgccggaactattggagatgtgttctgttt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2831 tgttggggaatgttctatgtgggaatacaacgccggaactattggagatgtgttctgttt 2890
Query: 124 caagccttcttccatcaacccagtttcatgagggtgaattgctctgtcgacaaaactcat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2891 caagccttcttccatcaacccagtttcatgagggtgaattgctctgtcgacaaaactcat 2950
Query: 184 cacctcatcgtcaccgtcgtacatttcatggccttgggggaaggtagtctttttcagtgg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2951 cacctcatcgtcaccgtcgtacatttcatggccttgggggaaggtagtctttttcagtgg 3010
Query: 244 gaagctgaagctggtgtcaatatcgaaggcggggtataattgatcagctggttgtgtgtt 303
||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 3011 gaagctgaagctggtgtcaatatcgaaggcggggtataattcaccagctggttgtgtgtg 3070
Query: 304 atccttttctctgttcaacagcatgtctttattcttgttccagtaatcaatcgtaattgt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3071 atccttttctctgttcaacagcatgtctttattcttgttccagtaatcaatcgtaattgt 3130
Query: 364 gctgttaccgatatccgtattcaaggctggctgagacactgagttttgagtagaatatac 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3131 gctgttaccgatatccgtattcaaggctggctgagacactgagttttgagtagaatatac 3190
Query: 424 ggcgtgctccggttgaa 440
|||||||||||||||||
Sbjct: 3191 ggcgtgctccggttgaa 3207
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5625
Number of Sequences: 1807
Number of extensions: 5625
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 838
length of database: 10,358,551
effective HSP length: 16
effective length of query: 822
effective length of database: 10,329,639
effective search space: 8490963258
effective search space used: 8490963258
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)